Open Science Labs

title: "Affiliated and Incubated Projects" description: "Affiliated and Incubated Projects" date: "2024-01-29" authors: ["OSL Team"] template: projects.html projects: - name: Alpha One Labs type: affiliated maintainer_name: Daniel Jones maintainer_email: info@alphaonelabs.com url: https://github.com/alphaonelabs/education-website communication_channel: provider: slack url: https://join.slack.com/t/alphaonelabs/shared_invite/zt-7dvtocfr-1dYWOL0XZwEEPUeWXxrB1A description: | Alpha One Labs is a nonprofit, open-source education platform dedicated to hands-on learning in tech, science, and engineering. Evolving from a Brooklyn hackerspace founded in 2009, we now provide cutting-edge STEM experiences to learners everywhere. Our mission is to inspire creativity, experimentation, and collaboration through engaging, hands-on innovation.

- name: AnamnesisAI type: incubated maintainer_name: Ivan Ogasawara maintainer_email: ivan.ogasawara@gmail.com url: https://osl-incubator.github.io/anamnesis.ai/ communication_channel: provider: discord url: https://opensciencelabs.org/discord description: | AnamnesisAI is a project focused on extracting anamnesis in FHIR format from text.

- name: ArtBox type: incubated maintainer_name: Ivan Ogasawara maintainer_email: ivan.ogasawara@gmail.com url: https://osl-incubator.github.io/artbox/ communication_channel: provider: discord url: https://opensciencelabs.org/discord description: | ArtBox is a tool set for handling multimedia files with a bunch of useful functions.

- name: ArxLang type: affiliated maintainer_name: Ivan Ogasawara maintainer_email: ivan.ogasawara@gmail.com url: https://arxlang.org communication_channel: provider: discord url: https://arxlang.org/discord description: | ArxLang Project is compounded mainly by three sub-projects: ASTx, IRx, and Arx. ASTx is an agnostic expression structure for AST. It is agnostic because it is not specific to any language, neither to the ArxLang project, although its main focus is to provide all needed feature for ArxLang. IRx aims to provide a translator to LLVM-IR from ASTx objects. Arx is a new programming language that uses the power of LLVM to provide a multi-architecture machine target code generation.

- name: Envers type: incubated maintainer_name: Ivan Ogasawara maintainer_email: ivan.ogasawara@gmail.com url: https://osl-incubator.github.io/envers/ communication_channel: provider: discord url: https://opensciencelabs.org/discord description: | Envers is a command-line tool (CLI) designed to manage and version environment variables for different deployment stages such as staging, development, and production. It provides a secure and organized way to handle environment-specific configurations.

- name: Extralit type: affiliated maintainer_name: Jonny Tran maintainer_email: nhat.c.tran@gmail.com url: https://github.com/extralit/extralit communication_channel: provider: slack url: https://join.slack.com/t/extralit/shared_invite/zt-32blg3602-0m0XewPBXF7776BQ3m7ZlA description: | Extralit is an open-source platform for researchers to extract structured data from scientific literature. It combines advanced document AI with collaborative human validation workflows to create analysis-ready datasets fit-for-purpose to any scientific domain, enabling faster evidence synthesis and meta-analysis.

- name: fqlearn type: incubated maintainer_name: Ever Vino maintainer_email: ever.vino00@gmail.com url: https://osl-pocs.github.io/fqlearn/ description: | This Project aims to facilitate the teaching of unit operations and thermodynamics.

- name: Makim type: affiliated maintainer_name: Ivan Ogasawara maintainer_email: ivan.ogasawara@gmail.com url: https://osl-incubator.github.io/makim/ communication_channel: provider: discord url: https://opensciencelabs.org/discord description: | Makim (or makim) is based on make and focus on improve the way to define targets and dependencies. Instead of using the Makefile format, it uses yaml format.

- name: Rago type: incubated maintainer_name: Ivan Ogasawara maintainer_email: ivan.ogasawara@gmail.com url: https://osl-incubator.github.io/rago/ communication_channel: provider: discord url: https://opensciencelabs.org/discord description: | Rago is a lightweight framework for RAG.

- name: noWorkflow type: affiliated maintainer_name: Joao Felipe maintainer_email: joaofelipenp@gmail.com url: https://gems-uff.github.io/noworkflow/ description: | The noWorkflow project aims at allowing scientists to benefit from provenance data analysis even when they don't use a workflow system. It transparently collects provenance from Python scripts and notebooks and provide tools to support the analysis and management of the provenance.

- name: PyDataStructs type: affiliated maintainer_name: Gagandeep Singh maintainer_email: gdp.1807@gmail.com url: https://pydatastructs.readthedocs.io/en/latest/ description: | PyDataStructs project aims to be a Python package for various data structures and algorithms (including their parallel implementations).

- name: PyMedX type: incubated maintainer_name: Ever Vino maintainer_email: ever.vino00@gmail.com url: https://osl-incubator.github.io/pymedx communication_channel: provider: discord url: https://opensciencelabs.org/discord description: | PyMedX is a Python library that provides access to PubMed/PubMed Central. This project is a fork from the archived project PyMed.

- name: SciCookie type: incubated maintainer_name: Ivan Ogasawara maintainer_email: ivan.ogasawara@gmail.com url: https://osl-incubator.github.io/scicookie communication_channel: provider: discord url: https://opensciencelabs.org/discord description: | SciCookie is a template developed by Open Science Labs that creates projects from project templates.

  • name: SDX type: affiliated maintainer_name: Ivan Ogasawara maintainer_email: ivan.ogasawara@gmail.com url: https://sdx-org.github.io/sdx/ communication_channel: provider: discord url: https://discord.gg/Nu4MdGj9jB description: | SDX provides a set of tools and libraries for health care services empowered by AI. It includes screening, diagnosis, treatments, prescriptions, clinical records, etc.

    • name: Sugar type: affiliated maintainer_name: Ivan Ogasawara maintainer_email: ivan.ogasawara@gmail.com url: https://sugar-org.github.io/sugar/ communication_channel: provider: discord url: https://opensciencelabs.org/discord description: | Sugar aims to organize your stack of containers, gathering some useful scripts and keeping this information centralized in a configuration file. So the command line would be very simple.
    • name: swarm-external-secrets type: affiliated maintainer_name: Sai Sanjay maintainer_email: saisanjay7660@gmail.com url: https://sugar-org.github.io/swarm-external-secrets/ communication_channel: provider: discord url: https://opensciencelabs.org/discord description: | A Docker Swarm secrets plugin that integrates with multiple secret management providers including HashiCorp Vault, AWS Secrets Manager, Azure Key Vault, and OpenBao.

Affiliated and Incubated Projects #

We proudly showcase a curated list of innovative and diverse projects that are part of the Open Science Labs family. Each of these projects embodies our commitment to open science and technology, and they play a pivotal role in driving forward our shared goals. These collaborations not only strengthen our community but also contribute significantly to the broader field of open source and scientific research. Below, you'll find information about affiliated and incubated projects.

Last update: 2025-11-05
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